▬
Stable prediction with radiomics data. Peeters, C.F.W.,
C. Übelhör, S.W. Mes, M. Martens, Koopman,
T., de Graaf, P.,
van Velden, F., Boellaard, R.
Castelijns, J.A., te Beest,
D., Heymans, M.W., & M.A.
van de Wiel (under revision).
arXiv
R Package
GitHub
Application
▬
Inflammatory bowel disease stratification by means
of microbiota analysis of rectal swabs.
Grasman, M.E., Budding, A.E., Peeters, C.F.W.,
van der Borden, R.J.W., Eck,
A., de Boer, N.K.H. Bouma, G.,
Savelkoul, P.H.,
& Bodegraven, A.A. (under revision).
Articles
Theory, Methodology, & Computation
▬
Targeted Fused Ridge Estimation of
Inverse Covariance Matrices from
Multiple High-Dimensional Data Classes.
Bilgrau, A.E.*, Peeters, C.F.W.*,
Eriksen, P.S., Bøgsted, M., & van Wieringen, W.N.
Journal of Machine Learning Research, 21(26):1-52 (2020).
pdf
Supplement
R Package
GitHub
▬
Adaptive group-regularized logistic elastic net
regression.
Münch, M., Peeters, C.F.W.,
van der Vaart, A.W., & van de Wiel, M.A.
Biostatistics, [Epub ahead of print] (2020).
DOI
Supplement
arXiv
R Package
GitHub
▬
The spectral condition number plot for
regularization parameter evaluation. Peeters, C.F.W., van de Wiel, M.A.,
& van Wieringen, W.N.
Computational Statistics,
35(2):629-646 (2020).
DOI
Supplement
arXiv
R Package
GitHub
▬
Updating of the Gaussian graphical model
through targeted penalized
estimation.
van Wieringen, W.N., Stam, K., Peeters, C.F.W.,
& M.A. van de Wiel.
Journal of Multivariate Analysis,
178:104621 (2020).
pdf
Supplement
▬
Voxelwise statistical methods to localize
practice variation in brain tumor surgery.
Eijgelaar, R., de Witt Hamer, P.,
Peeters, C.F.W., Barkhof, F., van herk, M.,
& Witte, M.
PLOS One, 14(9):e0222939 (2019).
DOI
Supplements
▬
Testing for pathway (in)activation using
Gaussian graphical models.
van Wieringen, W.N., Peeters, C.F.W.,
de Menezes, R.X., & van de Wiel, M.A.
Journal of the Royal Statistical Society, Series C,
67:1419-1436 (2018).
DOI
Supplement
▬
Bayesian Constrained-Model Selection for Factor Analytic
Modeling. Peeters, C.F.W. The Score, 77: April 2016 Issue (2016).
DOI
arXiv
▬
Ridge Estimation of Inverse Covariance Matrices
from High-Dimensional Data.
van Wieringen, W.N., & Peeters, C.F.W. Computational Statistics & Data Analysis, 103:284-303 (2016).
DOI
Supplement
arXiv
R Package
GitHub
▬
Pathophysiological domains underlying the metabolic syndrome:
an alternative factor analytic strategy. Peeters, C.F.W., Dziura, J., &
van Wesel, F.
Annals of Epidemiology, 24:762-770 (2014).
DOI
Supplement
arXiv
▬
Issues in the Design of Online Surveys for Measuring Unethical
Work Behavior:
Recommendations on the Basis of a
Split-Ballot Experiment.
Wouters, K., Maesschalck, J., Peeters, C.F.W.,
& Roosen, M.
Journal of Business Ethics, 120:275-289 (2014).
DOI
▬
Rotational Uniqueness Conditions Under Oblique Factor
Correlation Metric. Peeters, C.F.W. Psychometrika, 77:288-292 (2012).
DOI
arXiv
▬
A Note on a Simple and Practical Randomized Response Framework
for Eliciting Sensitive Dichotomous & Quantitative
Information. Peeters, C.F.W.,
Lensvelt-Mulders, G.J.L.M., & Lasthuizen, K.
Sociological Methods & Research, 39:283-296 (2010).
DOI
arXiv
Application
▬
Multiparametric functional MRI and 18F-FDG-PET
for survival prediction in patients with head and neck
squamous cell carcinoma treated with (chemo)radiation.
Martens, R.M., Koopman, T., Lavini, C., Meedi, A.,
Peeters, C.F.W., Noij, D.P.,
Zwezerijnen, G., Marcus, J.T., Vergeer, M.R., Leemans, R.,
de Bree, R., de Graaf, P., Boellaard, R., & Castelijns, J.A.
European Radiology, 31:616-628 (2021).
DOISupplement
▬
Network Analysis of the Participation and Activity
Inventory for Children and Youth (PAI-CY) 7-12 Years with Visual
Impairment.
Elsman, E.B.M., Peeters, C.F.W.,
van Nispen, R.M.A., &
van Rens, G.H.M.B.
Translational Vision Science & Technology, 9:19 (2020).
DOI
R Package
▬
Annual malignant transformation rate of oral
leukoplakia remains consistent: A long-term follow-up study.
Evren, I., Brouns, E.R., Wils, L.J., Poell, J.B.,
Peeters, C.F.W., Brakenhoff, R.H.,
Bloemena, E., & de Visscher, J.G.A.M.
Oral Oncology, 110:105014 (2020).
DOI
▬
Predictive value of quantitative 18F-FDG-PET
radiomics analysis in
patients with head and neck squamous cell carcinoma.
Martens, R.M., Koopman, T., Noij, D.P.,
Pfaehler, E., Übelhör, C., Sharma, S.,
Vergeer, M.R., Leemans, R., Hoekstra, O.S.,
Yaqub, M.,
Zwezerijnen, B.,
Heymans,
M.W., Peeters, C.F.W.,
de Bree, R., de Graaf, P., Castelijns, J.A., & Boellaard, R.
EJNMMI Research, 10:102 (2020).
DOISupplement
R Package
▬
Outcome prediction of head and neck
squamous cell carcinoma by MRI radiomic
signatures.
Mes, S., van Velden, F., Peltenburg, B.,
Peeters, C.F.W., te Beest, D., van de
Wiel, M.A., Mekke, J.,
Mulder, D., Martens, R.,
Castelijns, J., Pameijer, F., de Bree, R., Boellaard, R.,
Leemans, C.R., Brakenhoff, R., & de Graaf, P.
European Radiology, 30:6311-6321 (2020).
DOISupplement
R Package
▬
Who provides care in the last year of life?
A description of care networks of community-dwelling
older adults in the Netherlands.
Bijnsdorp, F.M., Pasman, H.R.W., Francke, A.L.,
Evans, N., Peeters, C.F.W., &
Broese van Groenou, M.I.
BMC Palliative Care, 18:41 (2019).
DOI
▬
Systemic and intrathecal immune activation
in association with cerebral and
cognitive outcomes in paediatric HIV.
Blokhuis, C., Peeters, C.F.W.,
Cohen, S., Scherpbier, H.J., Kuijpers, T.W., Reiss,
P., Kootstra, N.A., Teunissen, C.E.,
& Pajkrt, D.
Scientific Reports, 9:8004 (2019).
DOI
▬
Cross-cultural validation of the Functional Vision
Questionnaire for Children and Young People (FVQ_CYP) with
visual
impairment
in the Dutch population: Challenges and opportunities.
Elsman, E., Tadic, V., Peeters, C.F.W.,
van Rens, G.H.M.B., Rahi, J.S., & van
Nispen, R.M.A.
BMC Medical Research Methodology, 19:221 (2019).
DOI
▬
Erratum to "Circulating
metabolites and general cognitive ability and dementia:
Evidence from 11 cohort
studies"
[Alzheimer's & Dementia 2018; 14: 707-22].
van der Lee, S.J., Teunissen, C.E., Pool, R., Shipley,
M.J., Teumer, A.,
Chouraki, V., Melo van Lent, D., Tynkkynen, J.,
Fischer, K., Hernesniemi, J., Haller, T., Singh-Manoux, A.,
Verhoeven, A., Willemsen, G., de Leeuw, F.A., Wagner, H.,
van Dongen, J., Hertel, J., Budde, K., Willems van Dijk, K.,
Weinhold, L., Ikram, M.A., Pietzner, M., Perola, M.,
Wagner, M., Friedrich, N., Slagboom, P.E., Scheltens, P.,
Yang, Q., Gertzen, R.E., Egert, S., Li, S., Hankemeier, T.,
van Beijsterveldt, C.E.M., Vasan, R.S., Maier, W.,
Peeters, C.F.W., Grabe, H.J., Ramirez, A.,
Seshadri, S., Metspalu, A.,
Kivimäki, M., Salomaa, V., Demirkan, A., Boomsma, D.I.,
van der Flier, W., Amin, N., & van Duijn, C.M.
Alzheimer's & Dementia, 15:319 (2019).
DOI
▬
Zorgnetwerken: Wie zorgt voor thuiswonende ouderen
aan het levenseinde?
Bijnsdorp, F.M., Broese van Groenou, M.I., Francke,
A.L., Pasman, H.R.W., Evans, N.,
Peeters, C.F.W., & Kruijswijk, W.
Pallium, 20(4):24-27 (2018).
DOI
▬
Variability of core microbiota in newly
diagnosed treatment-naïve paediatric inflammatory
bowel disease patients.
de Meij, T.G.J.*, de Groot, E.F.J.*,
Peeters, C.F.W.,
de Boer, N.K.H., Kneepkens, F.,
Eck, A., Benninga, M.A.,
Savelkoul,
P.H.M., van Bodegraven, A.A., & Budding, A.E.
PLOS One, 13(8):e0197649 (2018).
DOIbioRXiv
▬
Circulating metabolites and general cognitive ability and
dementia: Evidence from 11 cohort studies.
van der Lee, S.J., Teunissen, C.E., Pool, R., Shipley, M.J., Teumer, A.,
Chouraki, V., Melo van Lent, D., Tynkkynen, J.,
Fischer, K., Hernesniemi, J., Haller, T., Singh-Manoux, A.,
Verhoeven, A., Willemsen, G., de Leeuw, F.A., Wagner, H.,
van Dongen, J., Hertel, J., Budde, K., Willems van Dijk, K.,
Weinhold, L., Ikram, M.A., Pietzner, M., Perola, M.,
Wagner, M., Friedrich, N., Slagboom, P.E., Scheltens, P.,
Yang, Q., Gertzen, R.E., Egert, S., Li, S., Hankemeier, T.,
van Beijsterveldt, C.E.M., Vasan, R.S., Maier, W.,
Peeters, C.F.W., Grabe, H.J., Ramirez, A.,
Seshadri, S., Metspalu, A.,
Kivimäki, M., Salomaa, V., Demirkan, A., Boomsma, D.I.,
van der Flier, W., Amin, N., & van Duijn, C.M.
Alzheimer's & Dementia, 14:707-722 (2018).
DOI
▬
Identification and validation of a 3-gene
methylation classifier for HPV-based cervical
screening on self-samples.
Verlaat, W., Snoek, B.C., Heideman, D.A.M., Wilting, S.M.,
Snijders, P.J.F., Novianti, P.W., van Splunter, A.P.,
Peeters, C.F.W.,
van Trommel, N.E., Massuger, L.F.A.G., Bekkers, R.L.M.,
Melchers, W.J.G., van Kemenade, F.J., Berkhof, J.,
van de Wiel, M.A.,
Meijer, C.J.L.M., & Steenbergen, R.D.M.
Clinical Cancer Research, 24:3456-3464 (2018).
DOI
▬
Blood-based metabolic signatures
in Alzheimer's Disease.
de Leeuw, F.A.*, Peeters, C.F.W.*,
Kester, M.I., Harms, A.C., Struys, E.A., Hankemeier, T.,
van Vlijmen, H.W.T., van der Lee, S.J.,
van Duijn, C.M., Scheltens, P.,
Demirkan, A., van de Wiel, M.A.,
van der Flier, W.M., & Teunissen, C.E.
Alzheimer's & Dementia: Diagnosis,
Assessment & Disease Monitoring, 8:196-207 (2017).
DOI
Supplement 1
Supplement 2
Supplement 3
arXiv
R Package
GitHub
▬
Detecting functional decline from normal aging to dementia:
Development and validation of a short version of the
Amsterdam IADL Questionnaire.
Jutten, R.J., Peeters, C.F.W.,
Leijdesdorff, S.M.J., Visser, P.J., Maier, A.B.,
Terwee, C.B., Scheltens, P., & Sikkes, S.A.M.
Alzheimer's & Dementia: Diagnosis,
Assessment & Disease Monitoring, 8:26-35 (2017).
DOI
arXiv
▬
Sitting too much: A hierarchy of socio-demographic
correlates.
Lakerveld, J., Loyen, A., Schotman, N.,
Peeters, C.F.W., Cardon, G., van der Ploeg,
H.P., Lien, N., Chastin, S., & Brug, J.
Preventive Medicine, 101:77-83 (2017).
DOI
▬
De MiniScan als psychiatrische interventie;
pilotonderzoek naar de
toegevoegde waarde van een gecomputeriseerd
classificatiesysteem.
Damhuis, N., van Megen, H.J.G.M., Peeters, C.F.W.,
& Vollema, M.G.
Tijdschrift voor Psychiatrie, 53(3):175-180 (2011).
PDF
Proceedings & Book Chapters
Theory, Methodology, & Computation
▬
Social Network Analysis of Corruption Structures:
Adjacency Matrices Supporting the
Visualization and Quantification of Layeredness. Peeters, C.F.W.
In: G. de Graaf (Ed.).
It is all about integrity, stupid:
Studies on, about or inspired by the
work of Leo Huberts.
Den Haag: Boom uitgevers, Chapter 20, pp. 201-219 (2019).
arXiv
GitHub
▬
Application of a New Ridge Estimator of the Inverse
Covariance Matrix to the Reconstruction of Gene-Gene
Interaction Networks.
van Wieringen, W.N., & Peeters, C.F.W.
In: C. Di Serio, P. liò, A. Nonis, & R. Tagliaferri (Eds.).
Computational Intelligence Methods for Bioinformatics
and Biostatistics.
Lecture Notes in Computer Science, vol 8623.
Springer, pp. 170-179 (2015).
DOI
R Package
GitHub
▬
Inequality Constrained Multilevel Models.
Kato, B.S., & Peeters, C.F.W.
In: H. Hoijtink, I. Klugkist, & P.A. Boelen (Eds.).
Bayesian Evaluation of Informative Hypotheses.
New York: Springer, pp. 273-295 (2008).
DOI
arXiv
▬
Measuring Corruption: Exploring the Iceberg.
Huberts, L.W.J.C., Lasthuizen, K. &
Peeters, C.F.W.
In: C. Sampford, A. Shacklock, C. Connors, & F. Galtung (Eds.).
Measuring Corruption.
Hampshire [etc.]: Ashgate Publishing (Series: Law,
Ethics and Governance), pp. 265-293 (2006).
PDF
Application
▬
Onderzoek naar corruptie en fraude in Nederlandse gemeenten.
Lasthuizen, K., Peeters, C.F.W., Huberts, L.W.J.C.,
& Hulsebosch, H.M.C.
In: L. Cleef, E. Janse, M. Kaptein, A. Koenders, L. Porrio, &
C. van Zwam (Eds.).
Jaarboek Beveiliging Totaal 2006.
Alphen aan den Rijn: Kluwer, pp. 199-208 (2006).
PDF
▬
Nieuw onderzoek naar de omvang van corruptie.
Huberts, L.W.J.C., Lasthuizen, K.M.,
Oppenhuis, E., & Peeters, C.F.W.
In: L.W.J.C. Huberts, & J.M. Nelen (Eds.).
Corruptie in het Nederlandse openbaar bestuur. Omvang,
aard en afdoening.
Utrecht: Lemma, pp. 69-94 (2005).
PDF
Monographs
▬
Bayesian Exploratory and Confirmatory Factor Analysis:
Perspectives on Constrained-Model Selection. Peeters, C.F.W.
Utrecht University (Ph.D. thesis, 2012)
PDF
▬
Measuring politically sensitive behavior. Peeters, C.F.W.
Amsterdam: Dynamics of Governance (ISBN: 9078223014) (2005)
PDF
Published (extended) Abstracts
Theory, Methodology, & Computation
▬
Gaussian moralized reciprocal graph modeling for genomic
data integration. Peeters, C.F.W., van Wieringen, W.N., &
van de Wiel, M.A.
In: L. Lusa, & J. Stare (Eds.).
International Conference Applied Statistics 2013.
Ljubljana, Slovenia: Statistical Society of Slovenia, p. 50 (2013).
PDF
Application
▬
CSF biomarkers for frontotemporal dementia and
its pathological subtypes.
Del Campo, M., Peeters, C.F.W., Chen-Plotkin, A.,
van der Flier, W., Meeter, L.H.H., van Swieten, J.C., Hu, W.T.,
Irwin, D.J., Pijnenburg, Y.A.L., & Teunissen, C.E.
Alzheimer's & Dementia,
16(Suppl. 5):e045851 (2020).
DOI
▬
Participation from children with visual impairment and
their parents' perspectives: a network modelling
approach of
the Participation and Activity Inventory for Children and
Youth (PAI-CY) questionnaire.
van Nispen, R.M.A., Elsman, E.B.M., van Rens, G.H.M.B.,
& Peeters, C.F.W. Investigative Ophthalmology & Visual Science,
61(7):1932 (2020).
DOI
▬
Novel CSF Protein Biomarkers
for Specific and Differential Diagnosis of AD.
Del Campo, M.,
Peeters, C.F.W.,
Pijnenburg, Y.A.L., Lemstra, E., van der Flier, W.M.,
& Teunissen, C.E.
Alzheimer's & Dementia,
15(7), Supplement:P918 (2019).
DOI
▬
Challenges in the cross-cultural
validation of the Functional Vision Questionnaire for
Children and Young people (FVQ_CYP)
with visual impairment.
Elsman, E., Tadic, V.,
Peeters, C.F.W.,
van Rens, G., Rahi, J., & van Nispen, R.
Quality of Life Research,
27 (Suppl 1):S65-S66 (2018).
DOI
▬
Metabolic blood-based biomarkers
relate to brain atrophy and white matter hyperintensities in
Alzheimer's disease.
de Leeuw, F.A., Tijms, B.M.,
Peeters, C.F.W.,
Kester, M.I., Scheltens, P., van
Duijn, C.M., Barkhof, F., Teunissen, C.E.,
& van der Flier, W.M.
Alzheimer's & Dementia,
14(7), Supplement:P401-P403 (2018).
DOI
▬
Profiling peripheral metabolic
dysregulation in Alzheimer's Disease:
The added value of multiple signatures.
de Leeuw, F.A., Peeters, C.F.W.,
Kester, M.I., Harms, A.C., Hankemeier, T., Struys, E.A.,
Demirkan, A., Scheltens, P.,
van Vlijmen, H.W.T., van de Wiel, M.A.,
van Duijn, C.M.,
van der Flier, W.M., & Teunissen, C.E.
Alzheimer's & Dementia, 13(7),
Supplement:P1024-P1025 (2017).
DOI
▬
Evaluation of a new intake questionnaire for
visually impaired young adults:
the Participation
and Activity Inventory for
Young Adults (PAI-YA).
Elsman, E.B.M., van Rens, G.H.M.B.,
Peeters, C.F.W., & van Nispen, R.M.A.
Acta Ophthalmologica, 95 (Suppl. 258):7 (2017).
DOI
▬
Microbiota-Based IBD Diagnostics proved robust for
inter-clinic variation.
Eck, A., de Groot, E.F., de Meij, T., Welling, M.,
Peeters, C.F.W.,
Savelkoul, P., & Budding, A.E.
Gastroenterology, 150(4), Supplement:S548-S549 (2016).
DOI
▬
When less is more: Detecting Functional Decline Using a
Short Version of the Amsterdam IADL Questionnaire.
Jutten, R.J., Peeters, C.F.W.,
Terwee, C.B., Maier, A.B., Binnekade, T.T., Visser, P.J.,
Leijdesdorff, S.M.J., Scheltens, P., & Sikkes, S.A.M.
Alzheimer's & Dementia, 12(7), Supplement:P498-P499 (2016).
DOI
▬
Is there a difference in health-related quality of life in
caregivers
based on the living situation of the person
with dementia over one year?
MacNeil-Vroomen, J., Hoeben, J., Peeters, C.F.W.,
Bosmans, J., De Rooij, S., Allore, H.G., Monin, J.,
& van Hout, H.P.J.
Alzheimer's & Dementia, 12(7), Supplement:P604 (2016).
DOI
▬
Quality Control, Preprocessing, and Integrative
Analyzes of EpiRaBio Thyroid Cancer Data. Peeters, C.F.W., van Wieringen, W.N.,
& van de Wiel, M.A.
Report Task 1.3.5
EpiRadBio (2014).
▬
Nederland fraude- en corruptieland?
Huberts, L.W.J.C., Hulschebosch, H., Lasthuizen, K.
& Peeters, C.F.W.
Integrity of Governance
report (2004).
PDF
Public Letters and Commentaries
▬
Response to draft of Expression
of Concern regarding Förster &
Denzler (2012, JESP, 48). Peeters, C.F.W.,
Chris A.J. Klaassen, & Mark A. van de Wiel (28/02/2017).
Link
▬
Response to second inquiry
regarding Förster & Denzler (2012, JESP, 48). Peeters, C.F.W.,
Chris A.J. Klaassen, & Mark A. van de Wiel (11/01/2017).
Link
▬
Response to the request for corrections
by Liberman and Denzler. Peeters, C.F.W.,
Chris A.J. Klaassen, & Mark A. van de Wiel (14/11/2016).
Link
▬
Metaresponse to public discussions of the
investigation into publications by dr. Förster Peeters, C.F.W.,
Chris A.J. Klaassen, & Mark A. van de Wiel (02/07/2015).
Link
▬
Response to public comments by dr. Liberman Peeters, C.F.W.,
Chris A.J. Klaassen, & Mark A. van de Wiel (02/07/2015).
Link
▬
Response to the letter by
Liberman and Denzler, and the statement by
Jens Förster. Peeters, C.F.W.,
Chris A.J. Klaassen, & Mark A. van de Wiel (15/05/2015).
Link